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Copyright © 2015 BIF Centre, University of Kalyani.
Developed & Maintained by
BIF Centre,
Department of Biochemistry & Biophysics,
University of Kalyani, Kalyani,
Nadia-741 235,
West Bengal India.
 

POSTDOCTORAL EXPERIENCE:

Visiting Research Scientist in Virologie et Immunologie Moléculaires, Paris Saclay University, UR892, INRA Domaine de Vilvert,
78352 Jouy-en-Josas, France from 15th February, 2016 to 30th April, 2016.

Visiting research scientist in Department of Computer Science, Hong Kong Baptist University, Hong Kong from 1st January, 2014 to
12th May, 2014.

Period: May, 2009 to December, 2010

Employer: Buck Institute for Age Research, 8001 Redwood Blvd., Novato, CA-94945, USA

Job Title: Postdoctoral Research Fellow

Responsibilities / Achievements: Conducting research in bioinformatics and computational biology

Period: February, 2008 to April, 2009

Employer: Center of Computational Biology and Bioinformatics, Department of Medical and Molecular Genetics, Indiana University Purdue
University,
Indianapolis, USA

Job Title: Postdoctoral Research Fellow

Responsibilities / Achievements: Conducting research in bioinformatics

Membership: International Society for Computational Biology (ISCB)

Editorial Responsibility: Editorial Board Member of the Journal “Journal of Cell Science and Molecular Biology” ISSN: 2350-0190

Research Project Funding:

International: Advanced Methods for Viral Detection and Anti-viral Screening funded by International Bio-Asia Project Campus France
for the period of 15.02.2016 to 15.02.2018.

National: Insight into human disease causing mutations in proteins by analyzing protein-protein interactions to identify the plausible causes of disease
propagation (SAN NO. 102/IFD/SAN/1823/2015-2016) funded by DBT for the period 06.08.2015 to 05.08.2018.

National: Structural insight into the interactions of the heat shock proteins and heat shock transcription factor σ32 in E. coli.  (Jointly with Dr. Rakhi
Dasgupta) funded by DBT for the period 24.5.2013 to 23.5.2016.


No. of Research Scholars:
1. Semanti Ghosh (University Research Fellow)
2. Nilkanta Chowdhury (Recipient of Rajiv Gandhi National Fellowship from UGC)
3. Ananya Ali (UGC-JRF)
4. Ria Biswas (DBT-Research Fellow)

Fellowships / Awards:

RECIPIENT OF YOUNG SCIENTIST AWARD FROM VENUS INTERNATIONAL FOUNDATION
(Regd. Trust in India Vide No. 18 / BK-IV/2015) in a ceremony at Hotel Le Royal Meridien, Chennai on 19th of December, 2015
Research Fellowship to Visit the Research Laboratory of Prof. Anny Slama-Schwok, Virologie et Immunologie Moléculaires
INRA UR892, Domaine de Vilvert, 78352 Jouy-en-Josas, France

Research Fellowship to Visit the Research Laboratory of Prof. Hailong Zhu, Hong Kong Baptist University, Hong Kong

2008-2010: NIH fellowship for postdoctoral research work

2008-2009: Travel Fellowship Award by the National Science Foundation, USA

Recipient of Best Paper Award for the paper titled “Determination of Molecular Structure for Drug Design Using Variable String Length Genetic Algorithm”
by Angshuman Bagchi, Sanghamitra Bandyopadhyay and Ujjawal Maulik, in the International Conference on High Performance Computing (HiPC) held
during Dec. 18-21, 2003

Merit Scholarship for Secondary and Higher Secondary Examinations, 1992-1994


PUBLICATIONS:

Conferences/ Meetings/ Workshops

“Altered PPI Due to Mutations in hPER2 and CKI Delta Locus, Causing ASPS” (Oral Presentation) First International
Conference on Intelligent Computing and Communication (ICICI2-2016), held during  February 18-19, 2016, organized by
Faculty of Engineering, Management and Technology, University of Kalyani

“Molecular Level Insight into the Interactions of SoxC and SoxD from Epsilonproteobacteria Sulfurimonas denitrificans: A
Biomolecular Computational Approach” (Oral Presentation) Second International Conference on Computer and
Communication Technologies (IC3T-2015) ,held during  July 24-26, 2015, organized by Department of CSE and ECE, CMR
Technical Campus, Kandlakoya (V), Medchal (M), Hyderabad 501401, India
“Use of Machine Learning Features to Detect Protein-protein Interaction Sites at the Molecular Level” (Oral Presentation)
Second International Conference on INformation systems Design and Intelligent Applications (INDIA-2015), during January
8-9, 2015,  organized by Faculty of Engineering, Technology and Management, University of Kalyani

“Analysis of Features from Protein-Protein Hetero-Complex Structures to Predict Protein Interaction Interfaces using Machine
Learning” (Oral Presentation) First International Conference on Computational Intelligence: Modelling, Techniques and
Applications (CIMTA - 2013), during September 27-28, 2013, organized by Department of Computer Science &Engineering,
University of Kalyani

“Structural bioinformatic study of sulfur compound metabolizing sox operon” (Oral Presentation) Bengal Science Lecture and
Satellite Conference on Last 100 Years of Science in India, during January 9-10, 2013, organized by West Bengal State
Council of Science and Technology and Department of Science and Technology, Government of West Bengal

“Identification of amino acid residues in  protein-protein interaction interfaces using  machine learning and a comparative
analysis  of the generalized sequence- and structure based features employed” (Oral Presentation) International Conference
on Intelligent Infrastructure, during December 1-2, 2012, organized by Computer Society of India (CSI), at Science City,
Kolkata, India

“Prediction of protein-protein interactions using machine learning techniques” (Oral Presentation) Conference on Informatics
& Integrative Biology (CIIB-2011), during December 14-16, 2011, at Bose Institute, A.J.C. Bose Centenary Building, P-1/12,
CIT Scheme - VII M, Kolkata - 700 054, India

“Prediction of protein-protein interaction with an eye to mutational analysis” (Poster) 9th Annual International Conference on
Computational Systems Bioinformatics (CSB), during August 16-18, 2010, at Stanford University, Stanford, USA

“Prediction of protein-protein interaction sites and their impact on genetic disease” (Oral Presentation) 7th Annual Rocky
Mountain Bioinformatics Conference, during December 10-12,  2009, Snowmass, Aspen, Colorado, USA

“In Silico Functional Profiling of Human Disease-Associated and Polymorphic Amino Acid Substitutions” (Poster) 7th Annual
Rocky Mountain Bioinformatics Conference, during December 10-12,  2009, Snowmass, Aspen, Colorado, USA

“Prediction of protein-protein interactions and their impact on genetic disease” (Oral Presentation) 10th. Annual Symposium
of Biomedical Computation at Stanford, held on November 7, 2009 at Stanford University, Stanford, USA

“Homology modeling and docking studies of human apolipoprotein E and heparanase” (Poster) Annual Scientific Retreat of
Louisiana Cancer Research Consortium, during March 27-28, 2009 at University Center, Xavier University of Louisiana, LA,
USA

“Analyses of features for the prediction of protein-protein interactions in protein hetero-complexes and their impact on
human disease” (Oral Presentation) 6th Annual Rocky Mountain Bioinformatics Conference, during December 4-7,  2008,
Snowmass, Aspen, Colorado, USA

“Analyses of features for prediction of protein-protein interactions in protein heterocomplexes and their impact on human
disease” (Poster) 2nd Annual Midwest Symposium on Computational Biology and Bioinformatics, held on October 4, 2008 at
Northwestern University, Urbana-Champaign, IL, USA

“Analyses of features for prediction of protein-protein interactions in heterocomplexes and their impact on human disease”
(Poster) in the Annual Symposium on Medical and Molecular Genetics, held on September 27, 2008, at Department of
Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, USA

Invited Talks:

“Molecular modeling of protein interactions in the sox operon”, at Pittsburgh Supercomputing Center, Pittsburgh,
Pennsylvania, USA on 4th April, 2010 

“Prediction of protein-protein interactions”, at Department of Biostatistics and Bioinformatics, Duke University School of
Medicine, Durham, North Carolina, USA on 22nd  April, 2009

“Structural biology of sulfur bacteria (Sox)”, at Max Planck Institute for Molecular Genetics - Ihnestraße 73 - 14195 Berlin, on
22nd January, 2008

“Structural Bioinformatic Study of Sulfur Compound Metabolizing sox operon”, A five day National Workshop on “Use of
Recombinant DNA in Modern Biotechnological Research” during December 17 - 21, 2013, at Biotechnology  Department,
National Institute of Technology, Durgapur

“Homology modeling of a dimeric repressor protein SoxR and analysis of its dimeric interface” (Tutorial) in DBT Sponsored
National Workshop on “To Predict and Model Biological Molecules and System”, during March 16-18, 2011, at Department of
Biochemistry and Biophysics, University of Kalyani

“Insight into Duchenne Muscular Dystrophy from the analyses of the Dystrophin protein and the mutations therein” in
“International Conference on Informatics & Integrative Biology”, during December 17-19, 2014, at Bioinformatics Centre,
Bose Institute, Kolkata, India

7 “Prediction of Protein-protein interactions by machine learning” in “2nd International Conference on Public Mental Health
and Neurosciences ICPMN-2015”, during December 9-10, 2015, at Jyoti Nivas College, Bangalore, India

8 “Computational Aspects of Bio-molecular Interactions” in “VIM Work in Progress”, on 22nd March, 2016, at Virologie et
Immunologie Moléculaires, Paris Saclay University, UR892, INRA Domaine de Vilvert, 78352 Jouy-en-Josas 

Peer Reviewed Journals:

2005

Structural insight into SoxC and SoxD interaction and their role in electron transport process in the novel global sulfur cycle
in Paracoccus pantotrophus
Angshuman Bagchi and Pradosh Roy
Biochemical Biophysical Research Communication (I.F: 2.474), Vol. 331, Pg. no. 1107- 1113, ISSN: 0006-291X

A structural study towards the understanding of the interactions of SoxY, SoxZ, and SoxB, leading to the oxidation of sulfur
anions via the novel global
sulfur oxidizing (sox) operon
Angshuman Bagchi and Tapash Chandra Ghosh
Biochemical Biophysical Research Communication (I.F: 2.474),  Vol. 335, Pg. no. 609-615, ISSN: 0006-291X 

Homology modeling of a transcriptional regulator SoxR of the lithotrophic sulfur oxidation (sox) operon in α- Proteobacteria
Angshuman Bagchi, Debjani Roy and Pradosh Roy
Journal of Biomolecular Structure and Dynamics (I.F: 2.983), Vol. 22, Pg. no. 571-578, ISSN: 0739-1102 (print version),
ISSN: 1538-0254 (electronic
version)

Active site driven ligand design: an evolutionary approach
Sanghamitra Bandyopadhyay, Angshuman Bagchi and Ujjawal Maulik
Journal of Bioinformatics and Computational Biology, Vol. 3, Pg. no. 1053-1070, ISSN: 0219-7200 (print version), ISSN:
1757-6334 (electronic version)

Tetrathiobacter kashmirensis gen. nov., sp. nov., a novel mesophilic, neutrophilic, tetrathionate-oxidizing, facultatively
chemolithotrophic
betaproteobacterium isolated from soil from a temperate orchard in Jammu and Kashmir, India
Wriddhiman Ghosh, Angshuman Bagchi, Sukhendu Mandal, Boomba Dam and Pradosh Roy
International Journal Systematic Evolutionary Microbiology (I.F: 2.798), Vol. 55(Pt 5), Pg. no. 1779-1787, ISSN: 1466-5026
(print version), ISSN: 1466-
5034 (electronic version)

2006

Structural study of two proteins SigE and ORF1 to predict their roles in the biochemical oxidation of sulfur anions via the
global sulfur oxidation operon
(sox) Angshuman Bagchi and Tapash Chandra Ghosh Computational Biology and Chemistry (I.F: 1.592), Vol. 30, Pg. no.
227-332, ISSN: 1476-9271

Structural insight into the interactions of SoxV, SoxW and SoxS in the process of transport of reductants during sulfur
oxidation by the novel global sulfur
oxidation reaction cycle Angshuman Bagchi and Tapash Chandra Ghosh Biophysical Chemistry (I.F: 2.145), Vol. 119,  Pg.
no. 7-13, ISSN: 0301-4622

Structural identification of a novel thioredoxin SoxS: Prediction of the function in the process of transport of reductants
during sulfur oxidation by the novel
global sulfur oxidation reaction cycle Angshuman Bagchi and Tapash Chandra Ghosh Journal of Molecular Structure:
Theochem (I.F: 1.369), Vol. 758, Pg. no. 113 - 118, ISSN: 2210-271X

Structural Identification of the Interactions of SoxA and SoxX During the Oxidation of Sulfur Anions via the Novel Global
Sulfur Oxidizing (Sox) Operon
Angshuman Bagchi and Tapash Chandra Ghosh Research Journal of Microbiology, Vol. 1, Pg. no. 172-182, ISSN: 1816-
4935

Structural and Functional Characterization of SoxW-a Thioredoxin Involved in the Transport of Reductants During Sulfur
Oxidation by the Global Sulfur
Oxidation Reaction Cycle Angshuman Bagchi and Tapash Chandra Ghosh Research Journal of Microbiology, Vol. 1, Pg. no.
392-400, ISSN: 1816-4935


2007

Homology modeling and molecular dynamics study of the interactions of SoxY and SoxZ: the central player of biochemical
oxidation of sulfur anions in
Pseudaminobacter salicylatoxidans Angshuman Bagchi and Tapash Chandra Ghosh Research Journal of Microbiology, Vol. 2,
Pg. no. 569 -576, ISSN: 1816-4935

Structural insight into the functionality of the transcriptional regulator SoxR from Paracoccus pantotrophus in sulfur
oxidation operon
Angshuman Bagchi and Tapash Chandra Ghosh Research Journal of Microbiology, Vol. 2, Pg. no. 735 -741, ISSN: 1816-
4935

2008

A structural analysis of the mode of action of ORF1 in Pseudaminobacter salicylatoxidans prediction of its role in the global
sulfur oxidation operon sox
Angshuman Bagchi Current Proteomics, Vol. 5, Pg. no. 176-180, ISSN: 1570-1646 (print version), ISSN: 1875-6247
(electronic version)

Structural interaction between DsrE-DsrF-DsrH proteins involved in the transport of electrons in the dsr operon
Angshuman Bagchi and Tapash Chandra Ghosh Journal of Biomolecular Structure and Dynamics (I.F: 2.983) , Vol.25, Pg.
no. 517-524 (Cover illustration), ISSN: 0739-1102 (print version), ISSN: 1538-
0254 (electronic version)

Study of the interactions between SigL and its associated factor from the pathogenic Mycobacterium ulcerans
Angshuman Bagchi International Journal of Integrative Biology, Vol.2, Pg. no. 190-194, ISSN: 0974-2816 (print version),
ISSN: 0973-8363 (electronic version)

Molecular modeling studies of some novel 9-arylacridine derivatives to elucidate their possible roles in topoisomerase I
inhibition
Sudipta Bhowmik, Angshuman Bagchi (Corresponding author) and Rita Ghosh International Journal of Integrative Biology,
Vol.2, Pg. no. 8-14, ISSN: 0974-2816 (print version), ISSN: 0973-8363 (electronic version)


2009

Structural characterization of the involvement of SigC in the regulation of the gene expression of
pathogenic Mycobacterium ulcerans Angshuman Bagchi Molecular Biology Reports (I.F: 1.958), Vol. 36, Pg. no. 965-969,
ISSN: 0301-4851 (print version), ISSN: 1573-4978 (electronic version)

Book Chapter

Prediction of Protein-Protein Interactions Angshuman Bagchi in Computational Intelligence and Pattern Analysis in Biological
Informatics Chapter 15, John Wiley & Sons, Hoboken, NJ, USA. doi:
10.1002/9780470872352; ISBN: 978-0-470-58159-9


2010

In Silico functional profiling of human disease-associated and polymorphic amino acid substitutions
Matthew Mort, Uday S. Evani, Vidhya G. Krishnan, Kishore K. Kamati, Peter H. Baenziger, Angshuman Bagchi, Brandon
Peters, Rakesh Sathyesh, Biao
Li, Yanan Sun, Bin Xue, Nigam Shah, Maricel Kann, David N. Cooper, Predrag Radivojac and Sean D. Mooney
Human Mutations (I.F: 5.05),  Vol. 31, Pg. no. 335-346, ISSN: 1098-1004

Chemotherapeutic potential of 9-Phenyl Acridine: Biophysical studies on its binding to DNA
Rita Ghosh, Sudipta Bhowmik, Angshuman Bagchi, Dipankar Das, Somnath Ghosh 
European Biophysics Journal (I.F: 2.474), Vol. 39, Pg. no. 1243-1249, ISSN: 0175-7571 (print version), ISSN: 1432-1017
(Online)

Possible role of 2, 2’- (Diazinodimethylidyne) di-(o-phenylene) dibenzoate, a novel hydrazine as an anti-HIV agent
Rita Ghosh, Dipanjan Guha, Sudipta Bhowmik and Angshuman Bagchi
Journal of Biophysics and Structural Biology, Vol. 2, Pg. no. 42-46, ISSN: 2141-2200

Restoration of Altered MicroRNA Expression in the ischemic heart with Resveratrol
Partha Mukhopadhyay, Subhendu Mukherjee, Kaimul Ahsan, Angshuman Bagchi, Pal Pacher, Dipak Das
PLoS ONE (I.F: 4.41), Vol. 5, Pg. no. e15705, eISSN: 1932-6203


2011

New direction to the solution of protein folding problem (Comment)
Angshuman Bagchi and Tapash Chandra Ghosh Journal of Biomolecular Structure and Dynamics (I.F: 9.35), Vol. 28, Pg.
no. 653-654, ISSN: 0739-1102 (print version), ISSN: 1538-0254 (electronic
version)

Structural modeling of SoxF protein from Chlorobium tepidium : an approach to understand the molecular basis of
thiosulfate oxidation
Angshuman Bagchi Biochemical and Biophysical Research Communications (I.F: 2.474), Vol. 414, Pg. no. 409-411, ISSN:
0006-291X

Structural characterization of the D-Tyr-tRNATyr deacylase from Bacillus lichenformis, an organism of great industrial
importance
Angshuman Bagchi Computational Molecular Bioscience, Vol. 1, Pg. no. 1-6, ISSN: 2165-3445 (print version), ISSN: 2165-
3453 (electronic version)

Structural analyses of the interactions of SoxY and SoxZ from thermo-neutrophilic Hydrogenobacter thermophilus
Angshuman Bagchi and Tapash Chandra Ghosh Journal of Biophysical Chemistry, Vol. 2, Pg. no. 408-413, ISSN: 2153-
036X, doi: 10.4236/jbpc.2011.24047


2012

Evolutionary analysis of prokaryotic heat shock transcription regulatory protein σ32
Sourav Singha Roy, Monobesh Patra, Tarakdas Basu, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
Gene (I.F: 2.246),  Vol.495, Pg. no. 49-55, ISSN: 0378-1119

Structural insight into the mode of interactions of SoxL from Allochromatium vinosum in the global sulfur oxidation cycle
Angshuman Bagchi Molecular Biology Reports (I.F: 1.958), Vol.39, Pg. no. 10243-10248, ISSN: 0301-4851 (print version),
ISSN: 1573-4978 (electronic version)

A brief overview of a few popular and important protein databases
Angshuman Bagchi Computational Molecular Bioscience (I.F: 0.48), Vol.2, Pg. no. 115-120, ISSN: 2165-3445 (print
version), ISSN: 2165-3453 (electronic version)

A structural insight into the prokaryotic heat shock transcription regulatory protein σ32: an implication of σ32-DnaK
interaction
Sourav Singha Roy, Monobesh Patra, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
Bioinformation (I.F: 1),  Vol. 8, Pg. no. 1026-1029, ISSN: 0973-2063


2013

Structural analyses of the permease like protein SoxT: a member of the sulfur compound metabolizing sox operon 
Angshuman Bagchi Gene (I.F: 2.246), Vol. 521, Pg. no. 207-210, ISSN: 0378-1119

Molecular Modelling Tools: A mini review
Sujay Ray and Angshuman Bagchi (Corresponding author)
Novus International Journal of Engineering Technology, Vol.1, Pg. no. 28-36, ISSN: 2320-7191

Prediction of possible interaction of SoxK with SoxXA complex in Allochromatium vinosum through Protein-protein docking:
An in-silico approach
Sujay Ray and Angshuman Bagchi (Corresponding author)
International Journal of Computational Bioinformatics and In Silico Modeling, Vol.2, Pg. no. 128-131, ISSN: 2320-0634

Mutation study of DsrM from Allochromatium vinosum using the amino acid sequences
Semanti Ghosh and Angshuman Bagchi (Corresponding author)
Meta Gene (Elsevier), Vol.1, Pg. no. 33-42, ISSN: 2214-5400

Characterization of DsrK and DsrO from Allochromatium vinosum and other proteobacteria using the amino acid sequences
Semanti Ghosh and Angshuman Bagchi (Corresponding author)
Research and Reviews: Journal of Material Sciences, Vol.1, Pg. no. 31-38, ISSN: 2347-2278 (print version), ISSN: 2321-
6212 (electronic version)

Analysis of Features from Protein-Protein Hetero-Complex Structures to Predict Protein Interaction Interfaces using Machine
Learning
Angshuman Bagchi
Procedia Technology (Elsevier), Vol. 10, Pg. no. 62-66, ISSN: 2212-0173

Amino Acid Sequence Comparison of DsrP Protein from Proteobacteria to Analyze the Probable Molecular Mechanism of
Sulfur Oxidation Process
Semanti Ghosh and Angshuman Bagchi (Corresponding author)
The Open Structural Biology Journal, Vol.  5, Pg. no. 1-10, ISSN: 1874-1991

Structural Analysis of the Interactions of SoxB Protein with SoxYZ complex from Allochromatium vinosum in the global
sulfur Oxidation Cycle
Sujay Ray and Angshuman Bagchi (Corresponding author)
Computational Molecular Biology, Vol.3, No.1 1-5, ISSN: 1927-5587, doi: 10.5376/cmb.2013.03.0001

DP 71 and Beta Dystroglycan Interaction: A Molecular Modeling Approach to Understand Duchenne Muscular Dystrophy
Simanti Bhattacharya, Amit Das, Rakhi Dasgupta and Angshuman Bagchi (Corresponding Author)
Journal of Proteins and Proteomics (I.F: 0.5), Vol. 4, Pg. no. 101-107, ISSN: 0975-8151

Structural insight into the Formin binding property of human Formin binding protein 4
Amit Das, Simanti Bhattachrya, Angshuman Bagchi (Corresponding author) and Rakhi Dasgupta
Journal of Proteins and Proteomics (I.F: 0.5), Vol. 4, Pg. no. 93-100, ISSN: 0975-8151

2014
Invited article:

Sequence based protein structure prediction software tools (Review Article) Angshuman Bagchi
Research- an Open Access Journal (ISSN:2334-1009) by Labome.org

Hypoglycosylation of dystroglycan due to T192M mutation: A molecular insight behind the fact
Simanti Bhattachrya, Amit Das, Semanti Ghosh, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
Gene (I.F: 2.246), Vol. 537, Pg. no. 108-114, ISSN: 0378-1119

Characterizations and structural analyses of the interactions between the essential human protein6 and Rab GTPase protein
from Plasmodium falciparum
Angshuman Bagchi
Journal of Applied Bioinformatics & Computational Biology, ISSN: 2329-9532, doi:10.4172/2329-9533.1000106

Characterization of the Leucine-Responsive Transcription Factor from Pathogenic Vibrio cholerae Using Molecular Modelling
and Molecular Dynamics
Simulations Angshuman Bagchi Current Synthetic and Systems Biology (OMICS Publishing Group), ISSN: 2332-0737, doi:
10.4172/2332-0737.2-110

Analyses of the presence of mutations in Dystrophin protein to predict their relative influences in the onset of Duchenne
Muscular Dystrophy
Simanti Bhattachrya, Amit Das, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
Cellular Signaling (I.F: 4.471), Vol. 26, Pg. no. 2857-2864, ISSN: 0898-6568

A Review on Phylogenetic Analysis: A Journey through Modern Era
Sourav Singha Roy, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
Computational Molecular Biosciences (I.F: 0.48), Vol.4, No.3, ISSN: 2165-3445 (print version), ISSN: 2165-3453 (electronic
version)

Book Chapter:

Structural insights into IbpA-IbpB interactions to Predict their roles in heat shock response
Sanchari Bhattacharjee, Rakhi Dasgupta, and Angshuman Bagchi (Corresponding author)
In Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics by Springer; ISBN:
978-981-287-260-9

Analysis of the Structural Details of DsrO Protein from Allochromatium vinosum to Identify the Role of the Protein in the
Redox Transport Process Through
the dsr Operon
Semanti Ghosh and Angshuman Bagchi (Corresponding author)
In Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics by Springer; ISBN:
978-981-287-260-9

LCMV Interaction Changes with T192M Mutation in Alpha-Dystroglycan
Simanti Bhattacharya, Sanchari Bhattacharjee, Prosun Kumar Biswas, Amit Das, Rakhi Dasgupta and Angshuman Bagchi
(Corresponding author)
In Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics by Springer; ISBN:
978-981-287-260-9

Structural and Functional Characterization of Arabidopsis thaliana WW Domain Containing Protein F4JC80
Amit Das, Simanti Bhattacharya, Angshuman Bagchi (Corresponding author), Rakhi Dasgupta
In Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics by Springer; ISBN:
978-981-287-260-9

A Computational Structural Biology of SoxR and DNA: A Modelling and Interactive Discern to Express
the Sox Operon in Pseudaminobacter salicylatoxidans (KCT001) for Global Sulphur Oxidation
Sujay Ray, Arundhati Banerjee and Angshuman Bagchi (Corresponding author)
Intelligent Computing and Applications by Springer; Book ISBN: 978-81-322-2267-5


2015:

Structural characterization of Fis - a transcriptional regulator from pathogenic Pasteurella multocida essential for expression
of virulence factors Angshuman Bagchi Gene (I.F: 2.319), Vol. 554, Pg. no. 249-253, ISSN: 0378-1119

Structural Characterizations of Metal Ion Binding Transcriptional Regulator CueR from Opportunistic Pathogen Pseudomonas
aeruginosa to Identify Its Possible Involvements in Virulence Angshuman Bagchi Applied Biochemistry and Biotechnology
(I.F: 1.687), Vol. 175, Pg. no. 649-656; ISSN: 0273-2289 (print version), ISSN: 1559-0291 (electronic version)

Comparative analysis of the mechanisms of sulfur anion oxidation and reduction by dsr operon to maintain environmental
sulfur balance Semanti Ghosh and Angshuman Bagchi (Corresponding author) Comput. Biol Chem. (I.F: 1.441), Vol. 59(Pt
A), Pg. no. 177-184; ISSN: 1476-9271

Computational analyses of the length and compositional variations of the FNBP4 gene across 10 different species Amit Das,
Simanti Bhattachrya, Sanchari Bhattacharjee, Angshuman Bagchi (Corresponding author) and Rakhi Dasgupta Gene (Impact
Factor: 2.246), Vol. 575, Pg. no. 765-777, ISSN: 0378-1119

In silico characterization of formin binding protein 4 family of proteins Amit Das, Simanti Bhattachrya, Angshuman Bagchi
(Corresponding author) and Rakhi Dasgupta Interdisciplinary Sciences: Computational Life Sciences (I.F: 0.672), Vol. 7, Pg.
no. 43-64; ISSN: 1913-2751 (print version), ISSN: 1867-1462 (electronic version)

An Overview of Protein-Protein Interactions Ananya Ali and Angshuman Bagchi (Corresponding author) Current Chemical
Biology, Vol. 9, Pg. no. 53-65; ISSN: 2212-7968 (print version), ISSN: 1872-3136 (electronic version)

Domain Wise Distribution of Mutations in Dystrophin Protein and Duchenne Muscular Dystrophy Simanti Bhattachrya, Amit
Das and Angshuman Bagchi (Corresponding author) Gene Technol. Vol. 4, Pg. no. 218-228; ISSN: 2329-6682

An Overview of DNA-Protein Interactions Nilkanta Chowdhury and Angshuman Bagchi (Corresponding author) Current
Chemical Biology, Vol. 9, Pg. no. 73-83; ISSN: 2212-7968 (print version), ISSN: 1872-3136 (electronic version)

The Small Heat-Shock Proteins IbpA and IbpB in E.coli: the Small ones with a Big Role Sanchari Bhattacharjee, Rakhi
Dasgupta and Angshuman Bagchi (Corresponding author) Current Chemical Biology, Vol. 9, Pg. no. 84-96; ISSN: 2212-
7968 (print version), ISSN: 1872-3136 (electronic version)

Implication from the predicted docked interaction of sigma H and exploration of its interaction with RNA polymerase in
Mycobacterium tuberculosis Aayatti Gupta, Simanti Bhattacharya, Angshuman Bagchi, Sukhendu Mandal Bioinformation (I.F:
1),  Vol. 11, Pg. no. 296-301, ISSN: 0973-206

Book Chapter:

Structural Analyses of the Mode of Binding between AANAT protein with 14-3-3 protein involved in Human Melatonin
Synthesis Ananya Ali, Sanchari Bhattacharjee and Angshuman Bagchi (Corresponding author) In Information Systems
Design and Intelligent Applications by the Series Advances in Intelligent System and Computing, Vol: 339, by Springer;
ISBN: 978-81-322-2249-1

Structural Bioinformatic Approach to Understand the Molecular Mechanism of the Interactions of small heat shock proteins
IbpA and IbpB with Lon Protease Sanchari Bhattacharjee, Angshuman Bagchi (Corresponding author), Rakhi Dasgupta In
Information Systems Design and Intelligent Applications by the Series Advances in Intelligent System and Computing, Vol:
339, by Springer; ISBN: 978-81-322-2249-1

The effect of T192M mutation in stability of alpha dystroglycan: study with molecular dynamics simulation Simanti
Bhattacharya, Amit Das, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author) In Information Systems Design
and Intelligent Applications by the Series Advances in Intelligent System and Computing, Vol: 339, by Springer; ISBN: 978-
81-322-2249-1

Understanding the interaction of human formin binding protein 4 with formin FMN1 Amit Das, Simanti Bhattacharya,
Angshuman Bagchi (Corresponding author), Rakhi Dasgupta In Information Systems Design and Intelligent Applications by
the Series Advances in Intelligent System and Computing, Vol: 339, by Springer; ISBN: 978-81-322-2249-1

Use of Machine Learning Features to Detect Protein-protein Interaction Sites at the Molecular Level Angshuman Bagchi In
Information Systems Design and Intelligent Applications by the Series Advances in Intelligent System and Computing, Vol:
339, by Springer; ISBN: 978-81-322-2249-1

In-silico structural analysis of SoxF protein through molecular modeling and protein-protein docking from Hydrogenophilus
thermoluteolus: An approach to understand the molecular mechanism of thiosulfate oxidation Sujay Ray and Angshuman
Bagchi (Corresponding author) In Information Systems Design and Intelligent Applications by the Series Advances in
Intelligent System and Computing, Vol: 339, by Springer; ISBN: 978-81-322-2249-1

Intermolecular Interaction Study of Dissimilatory Sulfite Reductase (DsrAB) from Sulfur Oxidizing Proteobacteria
Allochromatium vinosum  Semanti Ghosh and Angshuman Bagchi (Corresponding author) In Information Systems Design
and Intelligent Applications by the Series Advances in Intelligent System and Computing, Vol: 339, by Springer; ISBN: 978-
81-322-2249-1

An In-silico Structural Analysis of the Interactions of SoxY and SoxZ from Moderately Thermophilic Beta-proteobacterium,
Hydrogenophilus Thermoluteolus in the Global Sulfur Oxidation Cycle Sujay Ray and Angshuman Bagchi (Corresponding
author) In Information Systems Design and Intelligent Applications by the Series Advances in Intelligent System and
Computing, Vol: 339, by Springer; ISBN: 978-81-322-2249-1
 
Dr.Angshuman Bagchi, Ph.D. (Science).
Asistance Professor, Dept. of Biochemistry & Biophysics,
University of Kalyani.

CONTACT DETAILS:

Name: Angshuman Bagchi

Home Address: 66 A. Karunamayee Road, P.O. Talpukur, Kolkata-700 123, India

Phone Number: +91-9051948843, +91-9051163397 (M), +91-33-2593-4017 (R)

E-Mail:  angshumanb@gmail.com, angshu@klyuniv.ac.in

Educational Background:

M.Sc, PhD from Bose Institute, Kankurgachi, Kolkata, India. Qualified CSIR-NET in 2003 and
GATE in 2002.
Recipient of merit certificate from Indiana University School  of Medicine, Indianapolis,  IN, USA for  qualifying
the course titled “Biostatistics for Physicians: A short Course”
University of Kalyani, Nadia, West-Bengal, India.
Bioinformatics Infrastructure Facility
A DBT (Govt. of India) Sponsored Facility.
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